Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.38□□□□□ -0.43
Foxa1P35582 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Gm11918-201ENSMUST00000121660 179 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Gm12138-201ENSMUST00000122180 951 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.37□□□□□ -0.43
Foxa1P35582 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Foxa1P35582 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Gm44397-201ENSMUST00000195950 113 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Gm9794-201ENSMUST00000202370 423 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.37□□□□□ -0.43
Foxa1P35582 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.37□□□□□ -0.43
Foxa1P35582 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Foxa1P35582 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.37□□□□□ -0.43
Foxa1P35582 Grk6-205ENSMUST00000224653 2976 ntBASIC12.37□□□□□ -0.43
Foxa1P35582 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Foxa1P35582 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.37□□□□□ -0.43
Foxa1P35582 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxa1P35582 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.36□□□□□ -0.43
Foxa1P35582 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.36□□□□□ -0.43
Foxa1P35582 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.36□□□□□ -0.43
Foxa1P35582 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Foxa1P35582 Gm7063-201ENSMUST00000186840 981 ntBASIC12.36□□□□□ -0.43
Foxa1P35582 Gm2495-201ENSMUST00000191160 466 ntBASIC12.36□□□□□ -0.43
Foxa1P35582 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.36□□□□□ -0.43
Foxa1P35582 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.36□□□□□ -0.43
Foxa1P35582 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Foxa1P35582 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxa1P35582 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.35□□□□□ -0.43
Foxa1P35582 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Foxa1P35582 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Foxa1P35582 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 920.1 ms