Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14726-201ENSMUST00000120623 896 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.97□□□□□ -0.01
Col2a1P28481 Gm27320-201ENSMUST00000184892 109 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Mir339-201ENSMUST00000083659 96 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Col2a1P28481 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col2a1P28481 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.96□□□□□ -0.01
Col2a1P28481 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col2a1P28481 Gm13875-201ENSMUST00000120162 282 ntBASIC14.96□□□□□ -0.01
Col2a1P28481 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.96□□□□□ -0.01
Col2a1P28481 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Col2a1P28481 Gm8018-201ENSMUST00000173536 789 ntBASIC14.96□□□□□ -0.01
Col2a1P28481 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.96□□□□□ -0.01
Col2a1P28481 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col2a1P28481 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.96□□□□□ -0.01
Col2a1P28481 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.96□□□□□ -0.01
Col2a1P28481 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col2a1P28481 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col2a1P28481 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col2a1P28481 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col2a1P28481 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col2a1P28481 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm11531-201ENSMUST00000117614 555 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Gm17376-201ENSMUST00000166016 84 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm22058-201ENSMUST00000083393 310 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.95□□□□□ -0.02
Col2a1P28481 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col2a1P28481 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Col2a1P28481 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Col2a1P28481 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col2a1P28481 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm2546-201ENSMUST00000182630 991 ntBASIC14.95□□□□□ -0.02
Col2a1P28481 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.95□□□□□ -0.02
Col2a1P28481 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col2a1P28481 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms