Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfrsf1aP25118 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Tnfrsf1aP25118 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm15240-201ENSMUST00000118156 720 ntBASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms