Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl1P10146 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl1P10146 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.35□□□□□ -0.75
Ccl1P10146 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl1P10146 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ccl1P10146 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl1P10146 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.35□□□□□ -0.75
Ccl1P10146 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm34391-201ENSMUST00000203706 907 ntBASIC10.35□□□□□ -0.75
Ccl1P10146 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.35□□□□□ -0.75
Ccl1P10146 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl1P10146 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Ccl1P10146 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.35□□□□□ -0.75
Ccl1P10146 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.35□□□□□ -0.75
Ccl1P10146 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl1P10146 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Ccl1P10146 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl1P10146 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl1P10146 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl1P10146 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl1P10146 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl1P10146 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.34□□□□□ -0.75
Ccl1P10146 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.34□□□□□ -0.75
Ccl1P10146 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.34□□□□□ -0.75
Ccl1P10146 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.34□□□□□ -0.75
Ccl1P10146 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl1P10146 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl1P10146 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Ccl1P10146 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccl1P10146 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl1P10146 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Ccl1P10146 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl1P10146 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl1P10146 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccl1P10146 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccl1P10146 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccl1P10146 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ccl1P10146 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.33□□□□□ -0.76
Ccl1P10146 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccl1P10146 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms