Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa4P06798 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm16202-201ENSMUST00000117532 544 ntBASIC13.15□□□□□ -0.3
Hoxa4P06798 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm8810-201ENSMUST00000172895 754 ntBASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa4P06798 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.15□□□□□ -0.3
Hoxa4P06798 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa4P06798 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxa4P06798 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxa4P06798 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxa4P06798 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm24644-201ENSMUST00000157114 139 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm27839-201ENSMUST00000184242 106 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm37497-201ENSMUST00000195830 798 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxa4P06798 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm6091-201ENSMUST00000098307 165 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa4P06798 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.14□□□□□ -0.31
Hoxa4P06798 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa4P06798 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.13□□□□□ -0.31
Hoxa4P06798 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxa4P06798 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxa4P06798 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms