Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P04946 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
P04946 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.44□□□□□ -0.58
P04946 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.44□□□□□ -0.58
P04946 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
P04946 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.44□□□□□ -0.58
P04946 Gm11978-201ENSMUST00000122315 466 ntBASIC11.44□□□□□ -0.58
P04946 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.44□□□□□ -0.58
P04946 Gm7029-201ENSMUST00000173226 450 ntBASIC11.44□□□□□ -0.58
P04946 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
P04946 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P04946 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.44□□□□□ -0.58
P04946 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.44□□□□□ -0.58
P04946 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
P04946 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
P04946 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P04946 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P04946 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.43□□□□□ -0.58
P04946 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.43□□□□□ -0.58
P04946 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P04946 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P04946 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
P04946 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P04946 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.43□□□□□ -0.58
P04946 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.43□□□□□ -0.58
P04946 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
P04946 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
P04946 Snora73a-201ENSMUST00000082453 205 ntBASIC11.43□□□□□ -0.58
P04946 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P04946 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P04946 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.43□□□□□ -0.58
P04946 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
P04946 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.43□□□□□ -0.58
P04946 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.42□□□□□ -0.58
P04946 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
P04946 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.42□□□□□ -0.58
P04946 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P04946 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P04946 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04946 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04946 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04946 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P04946 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
P04946 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms