Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr1O70481 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ubr1O70481 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ubr1O70481 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm44262-201ENSMUST00000204969 372 ntBASIC17.03■□□□□ 0.32
Ubr1O70481 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ubr1O70481 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Ubr1O70481 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ubr1O70481 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr1O70481 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ubr1O70481 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.02■□□□□ 0.32
Ubr1O70481 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.02■□□□□ 0.32
Ubr1O70481 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.02■□□□□ 0.32
Ubr1O70481 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.02■□□□□ 0.32
Ubr1O70481 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ubr1O70481 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr1O70481 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ubr1O70481 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ubr1O70481 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ubr1O70481 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC17.02■□□□□ 0.31
Ubr1O70481 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm14017-201ENSMUST00000121934 386 ntBASIC17.02■□□□□ 0.31
Ubr1O70481 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.02■□□□□ 0.31
Ubr1O70481 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.02■□□□□ 0.31
Ubr1O70481 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ubr1O70481 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.01■□□□□ 0.31
Ubr1O70481 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.01■□□□□ 0.31
Ubr1O70481 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ubr1O70481 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.01■□□□□ 0.31
Ubr1O70481 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.01■□□□□ 0.31
Ubr1O70481 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.01■□□□□ 0.31
Ubr1O70481 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.01■□□□□ 0.31
Ubr1O70481 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Ubr1O70481 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ubr1O70481 Gm8798-201ENSMUST00000211877 1661 ntBASIC17■□□□□ 0.31
Ubr1O70481 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17■□□□□ 0.31
Ubr1O70481 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17■□□□□ 0.31
Ubr1O70481 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17■□□□□ 0.31
Ubr1O70481 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17■□□□□ 0.31
Ubr1O70481 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms