Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.32□□□□□ -0.28
Gm3139J3QK78 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.32□□□□□ -0.28
Gm3139J3QK78 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.32□□□□□ -0.28
Gm3139J3QK78 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3139J3QK78 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gm16202-201ENSMUST00000117532 544 ntBASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gm29127-201ENSMUST00000188304 517 ntBASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.31□□□□□ -0.28
Gm3139J3QK78 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm3139J3QK78 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms