Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm9824-201ENSMUST00000178707 561 ntBASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm10819-201ENSMUST00000099988 561 ntBASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cx3cr1Q9Z0D9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.33□□□□□ -0.59
Cx3cr1Q9Z0D9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cx3cr1Q9Z0D9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cx3cr1Q9Z0D9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cx3cr1Q9Z0D9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm33320-201ENSMUST00000192232 530 ntBASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Dupd1-202ENSMUST00000224735 548 ntBASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.33□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm11745-201ENSMUST00000121669 448 ntBASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm1401-201ENSMUST00000122048 772 ntBASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.32□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm8927-201ENSMUST00000181978 981 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms