Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.37□□□□□ -0.43
ClcnkaQ9WUB7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Syt7-205ENSMUST00000224135 1557 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm27437-201ENSMUST00000183429 107 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm5279-201ENSMUST00000199575 745 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.36□□□□□ -0.43
ClcnkaQ9WUB7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.35□□□□□ -0.43
ClcnkaQ9WUB7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms