Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHRF1Q9P1Y6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 YBX1P6-201ENST00000442962 1002 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AC107373.2-201ENST00000607735 490 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AL691432.1-201ENST00000596308 1422 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AC004987.2-201ENST00000395959 1148 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 GPAA1P2-201ENST00000417923 928 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 AC010328.2-201ENST00000597698 1111 ntBASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.47■■□□□ 1.03
PHRF1Q9P1Y6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 C1QBPP1-201ENST00000400117 770 ntBASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 AC243562.2-201ENST00000561247 970 ntBASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 AC000095.1-201ENST00000603208 874 ntBASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
PHRF1Q9P1Y6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 BAATP1-201ENST00000412284 1225 ntBASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 PFN1P12-201ENST00000455938 534 ntBASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 RHOQP1-201ENST00000555758 579 ntBASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.45■■□□□ 1.02
PHRF1Q9P1Y6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC007969.1-201ENST00000433675 447 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AP001094.4-201ENST00000579008 2176 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.44■■□□□ 1.02
PHRF1Q9P1Y6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms