Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.34□□□□□ -0.27
Tubb3Q9ERD7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubb3Q9ERD7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Tubb3Q9ERD7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubb3Q9ERD7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tubb3Q9ERD7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm4804-201ENSMUST00000182234 999 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm19220-201ENSMUST00000222682 803 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tubb3Q9ERD7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm5425-201ENSMUST00000214125 459 ntBASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.32□□□□□ -0.28
Tubb3Q9ERD7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms