Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdc40Q9DC48 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gm15678-201ENSMUST00000117573 960 ntBASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gm6266-201ENSMUST00000203844 806 ntBASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.46□□□□□ -0.41
Cdc40Q9DC48 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdc40Q9DC48 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdc40Q9DC48 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Mir7654-201ENSMUST00000185082 70 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.45□□□□□ -0.42
Cdc40Q9DC48 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms