Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Syt7-205ENSMUST00000224135 1557 ntBASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hcfc2Q9D968 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Gm18057-201ENSMUST00000208220 503 ntBASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hcfc2Q9D968 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Matn2-203ENSMUST00000226766 3252 ntBASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms