Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm7063-201ENSMUST00000186840 981 ntBASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm20445-201ENSMUST00000061905 565 ntBASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp1b1Q99LU0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Chmp1b1Q99LU0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp1b1Q99LU0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms