Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm11591-201ENSMUST00000120063 702 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.4■□□□□ 0.06
Rfc4Q99J62 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfc4Q99J62 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Rfc4Q99J62 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.39■□□□□ 0.06
Rfc4Q99J62 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Gm7046-201ENSMUST00000221351 977 ntBASIC15.39■□□□□ 0.05
Rfc4Q99J62 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.39■□□□□ 0.05
Rfc4Q99J62 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfc4Q99J62 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.38■□□□□ 0.05
Rfc4Q99J62 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gm4986-201ENSMUST00000119731 549 ntBASIC15.38■□□□□ 0.05
Rfc4Q99J62 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Mospd4-201ENSMUST00000180618 576 ntBASIC15.38■□□□□ 0.05
Rfc4Q99J62 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.38■□□□□ 0.05
Rfc4Q99J62 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc4Q99J62 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc4Q99J62 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms