Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm9063-201ENSMUST00000223299 582 ntBASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm6912-201ENSMUST00000117218 544 ntBASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm24420-201ENSMUST00000176676 59 ntBASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm5425-201ENSMUST00000214125 459 ntBASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb4Q91XZ6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdhb4Q91XZ6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb4Q91XZ6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms