Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm9797-201ENSMUST00000052902 613 ntBASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb8Q91XZ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb8Q91XZ2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gm15321-201ENSMUST00000121290 288 ntBASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb8Q91XZ2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms