Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg1dQ8VE91 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Gm27772-201ENSMUST00000184900 187 ntBASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.32□□□□□ -0.28
Retreg1dQ8VE91 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Mir698-201ENSMUST00000102164 109 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm12485-201ENSMUST00000119641 291 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm26464-201ENSMUST00000157094 305 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm25857-201ENSMUST00000082788 129 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm5356-201ENSMUST00000093326 615 ntBASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retreg1dQ8VE91 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg1dQ8VE91 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg1dQ8VE91 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retreg1dQ8VE91 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms