Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Gm7230-201ENSMUST00000173026 815 ntBASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
Ccdc9Q8VC31 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ccdc9Q8VC31 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Gm43417-201ENSMUST00000201586 5207 ntBASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ccdc9Q8VC31 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm27177-202ENSMUST00000183514 2703 ntBASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm11764-201ENSMUST00000120221 623 ntBASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm43727-201ENSMUST00000198021 2647 ntBASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm43860-201ENSMUST00000201742 2705 ntBASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Gm36970-201ENSMUST00000193688 1859 ntBASIC16.08■□□□□ 0.16
Ccdc9Q8VC31 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc9Q8VC31 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms