Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim52Q8CDV4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim52Q8CDV4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim52Q8CDV4 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.44■□□□□ 0.22
Trim52Q8CDV4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim52Q8CDV4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gm27243-201ENSMUST00000183964 521 ntBASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.43■□□□□ 0.22
Trim52Q8CDV4 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.43■□□□□ 0.22
Trim52Q8CDV4 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim52Q8CDV4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gm13316-201ENSMUST00000140537 691 ntBASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gm8738-201ENSMUST00000172606 329 ntBASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gm4857-201ENSMUST00000192718 785 ntBASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim52Q8CDV4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm24255-201ENSMUST00000104481 128 ntBASIC16.41■□□□□ 0.22
Trim52Q8CDV4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm37489-201ENSMUST00000191883 159 ntBASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm21769-201ENSMUST00000211922 111 ntBASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim52Q8CDV4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim52Q8CDV4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.4■□□□□ 0.22
Trim52Q8CDV4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim52Q8CDV4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim52Q8CDV4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms