Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Shisa4Q8CA71 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.5■□□□□ 0.07
Shisa4Q8CA71 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shisa4Q8CA71 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shisa4Q8CA71 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shisa4Q8CA71 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm11618-201ENSMUST00000117946 267 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm29705-201ENSMUST00000212598 474 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Shisa4Q8CA71 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Gm8805-201ENSMUST00000117848 313 ntBASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Gm14660-201ENSMUST00000119809 575 ntBASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Shisa4Q8CA71 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Gm23931-201ENSMUST00000103842 109 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Gm16202-201ENSMUST00000117532 544 ntBASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.47■□□□□ 0.07
Shisa4Q8CA71 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms