Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim9Q8C7M3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm26315-201ENSMUST00000083890 321 ntBASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim9Q8C7M3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim9Q8C7M3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim9Q8C7M3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim9Q8C7M3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms