Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptcd1Q8C2E4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptcd1Q8C2E4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Gm6023-201ENSMUST00000118217 606 ntBASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptcd1Q8C2E4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Gm11618-201ENSMUST00000117946 267 ntBASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Gm6222-202ENSMUST00000182143 629 ntBASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Gm38158-201ENSMUST00000194617 339 ntBASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Nsd1-205ENSMUST00000224693 852 ntBASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ptcd1Q8C2E4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.46■□□□□ 0.22
Ptcd1Q8C2E4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ptcd1Q8C2E4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ptcd1Q8C2E4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ptcd1Q8C2E4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm17330-201ENSMUST00000221047 165 ntBASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm16372-201ENSMUST00000073088 450 ntBASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ptcd1Q8C2E4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ptcd1Q8C2E4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms