Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.55□□□□□ -0.4
Cpne1Q8C166 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpne1Q8C166 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpne1Q8C166 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne1Q8C166 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpne1Q8C166 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Cpne1Q8C166 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gm14928-201ENSMUST00000120198 477 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gm18307-201ENSMUST00000206864 949 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.54□□□□□ -0.4
Cpne1Q8C166 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpne1Q8C166 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.53□□□□□ -0.4
Cpne1Q8C166 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gm17330-201ENSMUST00000221047 165 ntBASIC12.53□□□□□ -0.4
Cpne1Q8C166 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.53□□□□□ -0.4
Cpne1Q8C166 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.53□□□□□ -0.4
Cpne1Q8C166 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpne1Q8C166 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpne1Q8C166 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cpne1Q8C166 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cpne1Q8C166 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.52□□□□□ -0.41
Cpne1Q8C166 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.52□□□□□ -0.41
Cpne1Q8C166 Gm23984-201ENSMUST00000157139 203 ntBASIC12.52□□□□□ -0.41
Cpne1Q8C166 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms