Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Gm26461-201ENSMUST00000175064 290 ntBASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Gm6458-201ENSMUST00000211573 635 ntBASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Npas4Q8BGD7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Npas4Q8BGD7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Gm11978-201ENSMUST00000122315 466 ntBASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.04□□□□□ -0.16
Npas4Q8BGD7 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.04□□□□□ -0.16
Npas4Q8BGD7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npas4Q8BGD7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.03□□□□□ -0.16
Npas4Q8BGD7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Gm10434-201ENSMUST00000101158 471 ntBASIC14.03□□□□□ -0.16
Npas4Q8BGD7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms