Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rpp38Q80UU2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Gm6180-201ENSMUST00000065243 498 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rpp38Q80UU2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm14928-201ENSMUST00000120198 477 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm28911-201ENSMUST00000188837 117 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm8515-201ENSMUST00000194852 576 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm8463-201ENSMUST00000208573 613 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.37□□□□□ -0.27
Rpp38Q80UU2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms