Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm45495-201ENSMUST00000200940 1700 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm43134-201ENSMUST00000199434 1886 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm12286-201ENSMUST00000119246 1002 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm44136-201ENSMUST00000203819 1106 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Gm5904-201ENSMUST00000210286 865 ntBASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slx4Q6P1D7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gm5466-201ENSMUST00000119395 1890 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Rprl1-202ENSMUST00000198476 238 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gm7848-201ENSMUST00000210739 718 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gm7207-201ENSMUST00000211575 1067 ntBASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slx4Q6P1D7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm12058-201ENSMUST00000118614 437 ntBASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm13813-201ENSMUST00000120998 787 ntBASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm17040-202ENSMUST00000170597 889 ntBASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm3508-201ENSMUST00000186012 792 ntBASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slx4Q6P1D7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm7593-201ENSMUST00000187246 644 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm37201-201ENSMUST00000191845 523 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm43830-201ENSMUST00000198760 1067 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 AC141438.2-201ENSMUST00000215068 271 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Dhrs4-202ENSMUST00000226168 828 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 AC135114.1-201ENSMUST00000228682 270 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms