Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Gm2546-201ENSMUST00000182630 991 ntBASIC12.38□□□□□ -0.43
AtmQ62388 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.38□□□□□ -0.43
AtmQ62388 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.38□□□□□ -0.43
AtmQ62388 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.38□□□□□ -0.43
AtmQ62388 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
AtmQ62388 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Gm12058-201ENSMUST00000118614 437 ntBASIC12.37□□□□□ -0.43
AtmQ62388 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.37□□□□□ -0.43
AtmQ62388 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.37□□□□□ -0.43
AtmQ62388 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.37□□□□□ -0.43
AtmQ62388 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
AtmQ62388 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AtmQ62388 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.37□□□□□ -0.43
AtmQ62388 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.37□□□□□ -0.43
AtmQ62388 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.37□□□□□ -0.43
AtmQ62388 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.37□□□□□ -0.43
AtmQ62388 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
AtmQ62388 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
AtmQ62388 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
AtmQ62388 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.36□□□□□ -0.43
AtmQ62388 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gm12380-201ENSMUST00000119012 544 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gm27046-201ENSMUST00000182160 463 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gm8325-201ENSMUST00000099086 453 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
AtmQ62388 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
AtmQ62388 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.36□□□□□ -0.43
AtmQ62388 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.36□□□□□ -0.43
AtmQ62388 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.36□□□□□ -0.43
AtmQ62388 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
AtmQ62388 Gm2445-201ENSMUST00000182798 989 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.36□□□□□ -0.43
AtmQ62388 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.36□□□□□ -0.43
AtmQ62388 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.36□□□□□ -0.43
AtmQ62388 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
AtmQ62388 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
AtmQ62388 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
AtmQ62388 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 Gm12015-201ENSMUST00000117065 843 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Gm12899-201ENSMUST00000120565 551 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Gm25545-201ENSMUST00000122673 323 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms