Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scn9aQ62205 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scn9aQ62205 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Scn9aQ62205 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Scn9aQ62205 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn9aQ62205 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scn9aQ62205 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Scn9aQ62205 Gm13736-201ENSMUST00000119272 253 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Rprl1-202ENSMUST00000198476 238 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm9211-201ENSMUST00000182882 975 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm37201-201ENSMUST00000191845 523 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm38092-201ENSMUST00000195600 653 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm45433-201ENSMUST00000209386 247 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.45■□□□□ 0.06
Scn9aQ62205 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.45■□□□□ 0.06
Scn9aQ62205 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scn9aQ62205 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn9aQ62205 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Spcs1-203ENSMUST00000226374 592 ntBASIC15.44■□□□□ 0.06
Scn9aQ62205 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.44■□□□□ 0.06
Scn9aQ62205 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.44■□□□□ 0.06
Scn9aQ62205 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Gm11667-201ENSMUST00000119828 486 ntBASIC15.44■□□□□ 0.06
Scn9aQ62205 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.44■□□□□ 0.06
Scn9aQ62205 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.44■□□□□ 0.06
Scn9aQ62205 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.44■□□□□ 0.06
Scn9aQ62205 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.44■□□□□ 0.06
Scn9aQ62205 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scn9aQ62205 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scn9aQ62205 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm13296-201ENSMUST00000117854 997 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms