Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Six4Q61321 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Six4Q61321 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.51□□□□□ -0.25
Six4Q61321 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.51□□□□□ -0.25
Six4Q61321 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.51□□□□□ -0.25
Six4Q61321 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.51□□□□□ -0.25
Six4Q61321 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.51□□□□□ -0.25
Six4Q61321 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.51□□□□□ -0.25
Six4Q61321 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.51□□□□□ -0.25
Six4Q61321 Gm45841-201ENSMUST00000207700 164 ntBASIC13.51□□□□□ -0.25
Six4Q61321 Gm18473-201ENSMUST00000220543 868 ntBASIC13.51□□□□□ -0.25
Six4Q61321 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Six4Q61321 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Six4Q61321 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.5□□□□□ -0.25
Six4Q61321 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Gm6152-201ENSMUST00000151704 340 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Six4Q61321 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Gm8598-201ENSMUST00000221184 836 ntBASIC13.5□□□□□ -0.25
Six4Q61321 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Itm2b-204ENSMUST00000228637 783 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Six4Q61321 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.5□□□□□ -0.25
Six4Q61321 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.5□□□□□ -0.25
Six4Q61321 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Six4Q61321 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Six4Q61321 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.49□□□□□ -0.25
Six4Q61321 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Six4Q61321 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Six4Q61321 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.49□□□□□ -0.25
Six4Q61321 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Six4Q61321 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Six4Q61321 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Six4Q61321 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Six4Q61321 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.49□□□□□ -0.25
Six4Q61321 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.49□□□□□ -0.25
Six4Q61321 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.49□□□□□ -0.25
Six4Q61321 Gm7287-201ENSMUST00000205267 602 ntBASIC13.49□□□□□ -0.25
Six4Q61321 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.49□□□□□ -0.25
Six4Q61321 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.49□□□□□ -0.25
Six4Q61321 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms