Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Syt7-204ENSMUST00000223586 1344 ntBASIC12.66□□□□□ -0.38
Ripk1Q60855 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.66□□□□□ -0.38
Ripk1Q60855 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.66□□□□□ -0.38
Ripk1Q60855 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.66□□□□□ -0.38
Ripk1Q60855 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ripk1Q60855 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ripk1Q60855 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm14057-201ENSMUST00000120631 482 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm20949-201ENSMUST00000206478 952 ntBASIC12.65□□□□□ -0.38
Ripk1Q60855 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ripk1Q60855 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
Ripk1Q60855 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ripk1Q60855 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ripk1Q60855 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.64□□□□□ -0.39
Ripk1Q60855 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ripk1Q60855 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ripk1Q60855 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ripk1Q60855 Gm22189-201ENSMUST00000103822 86 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms