Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
Traf3Q60803 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.02□□□□□ -0.16
Traf3Q60803 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf3Q60803 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.02□□□□□ -0.17
Traf3Q60803 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.02□□□□□ -0.17
Traf3Q60803 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Traf3Q60803 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Traf3Q60803 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Gm7287-201ENSMUST00000205267 602 ntBASIC14.02□□□□□ -0.17
Traf3Q60803 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.02□□□□□ -0.17
Traf3Q60803 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Traf3Q60803 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.02□□□□□ -0.17
Traf3Q60803 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf3Q60803 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.02□□□□□ -0.17
Traf3Q60803 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.01□□□□□ -0.17
Traf3Q60803 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gm15806-201ENSMUST00000120696 955 ntBASIC14.01□□□□□ -0.17
Traf3Q60803 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gm6152-201ENSMUST00000151704 340 ntBASIC14.01□□□□□ -0.17
Traf3Q60803 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.01□□□□□ -0.17
Traf3Q60803 Itm2b-204ENSMUST00000228637 783 ntBASIC14.01□□□□□ -0.17
Traf3Q60803 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Traf3Q60803 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Traf3Q60803 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Gm14371-201ENSMUST00000138925 1518 ntBASIC14□□□□□ -0.17
Traf3Q60803 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14□□□□□ -0.17
Traf3Q60803 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14□□□□□ -0.17
Traf3Q60803 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Traf3Q60803 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Traf3Q60803 Gm5303-201ENSMUST00000117943 1252 ntBASIC14□□□□□ -0.17
Traf3Q60803 Gm6447-201ENSMUST00000118905 835 ntBASIC14□□□□□ -0.17
Traf3Q60803 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14□□□□□ -0.17
Traf3Q60803 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14□□□□□ -0.17
Traf3Q60803 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Traf3Q60803 Gm6244-201ENSMUST00000178732 841 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms