Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc27Q3V036 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Gm9229-201ENSMUST00000222777 126 ntBASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc27Q3V036 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Gm46209-201ENSMUST00000217912 553 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc27Q3V036 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.08■□□□□ 0.33
Ccdc27Q3V036 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Gm21470-201ENSMUST00000187680 696 ntBASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc27Q3V036 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms