Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm5051-201ENSMUST00000204085 485 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Fam196aQ3USH1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gm15547-201ENSMUST00000122152 333 ntBASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.41□□□□□ -0.26
Fam196aQ3USH1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Fam196aQ3USH1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm6447-201ENSMUST00000118905 835 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm8566-201ENSMUST00000120174 465 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm2546-201ENSMUST00000182630 991 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm9211-201ENSMUST00000182882 975 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm44405-201ENSMUST00000198952 126 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm5950-201ENSMUST00000213337 772 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Fam196aQ3USH1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms