Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cul4aQ3TCH7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gm26308-201ENSMUST00000157768 69 ntBASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cul4aQ3TCH7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Cul4aQ3TCH7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cul4aQ3TCH7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cul4aQ3TCH7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cul4aQ3TCH7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cul4aQ3TCH7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Gm17837-201ENSMUST00000186435 985 ntBASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Gm17795-201ENSMUST00000214505 757 ntBASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Gm5161-201ENSMUST00000075243 853 ntBASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cul4aQ3TCH7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gm14701-201ENSMUST00000117156 348 ntBASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cul4aQ3TCH7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms