Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.23□□□□□ -0.29
Shox2P70390 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.23□□□□□ -0.29
Shox2P70390 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.23□□□□□ -0.29
Shox2P70390 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.23□□□□□ -0.29
Shox2P70390 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.23□□□□□ -0.29
Shox2P70390 Gm11543-201ENSMUST00000120758 370 ntBASIC13.23□□□□□ -0.29
Shox2P70390 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.23□□□□□ -0.29
Shox2P70390 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.23□□□□□ -0.29
Shox2P70390 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.23□□□□□ -0.29
Shox2P70390 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.23□□□□□ -0.29
Shox2P70390 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.23□□□□□ -0.29
Shox2P70390 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.23□□□□□ -0.29
Shox2P70390 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.23□□□□□ -0.29
Shox2P70390 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shox2P70390 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Shox2P70390 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Shox2P70390 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.22□□□□□ -0.29
Shox2P70390 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.22□□□□□ -0.29
Shox2P70390 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Gm27628-201ENSMUST00000184911 107 ntBASIC13.22□□□□□ -0.29
Shox2P70390 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.22□□□□□ -0.29
Shox2P70390 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.22□□□□□ -0.29
Shox2P70390 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.22□□□□□ -0.29
Shox2P70390 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Shox2P70390 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.22□□□□□ -0.29
Shox2P70390 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shox2P70390 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.22□□□□□ -0.29
Shox2P70390 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.21□□□□□ -0.29
Shox2P70390 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Shox2P70390 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Shox2P70390 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Gm43347-201ENSMUST00000200226 580 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Gm45453-201ENSMUST00000211758 853 ntBASIC13.21□□□□□ -0.29
Shox2P70390 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.21□□□□□ -0.29
Shox2P70390 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.21□□□□□ -0.29
Shox2P70390 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Shox2P70390 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shox2P70390 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Shox2P70390 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms