Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Tpm1P58771 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.95□□□□□ -0.02
Tpm1P58771 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.94□□□□□ -0.02
Tpm1P58771 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tpm1P58771 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm11745-201ENSMUST00000121669 448 ntBASIC14.94□□□□□ -0.02
Tpm1P58771 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.94□□□□□ -0.02
Tpm1P58771 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.94□□□□□ -0.02
Tpm1P58771 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tpm1P58771 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Tpm1P58771 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.94□□□□□ -0.02
Tpm1P58771 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tpm1P58771 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Tpm1P58771 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.93□□□□□ -0.02
Tpm1P58771 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.93□□□□□ -0.02
Tpm1P58771 Gm9719-201ENSMUST00000162765 543 ntBASIC14.93□□□□□ -0.02
Tpm1P58771 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Tpm1P58771 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.93□□□□□ -0.02
Tpm1P58771 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.93□□□□□ -0.02
Tpm1P58771 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tpm1P58771 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tpm1P58771 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.92□□□□□ -0.02
Tpm1P58771 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tpm1P58771 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tpm1P58771 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms