Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox3P53784 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.87□□□□□ -0.35
Sox3P53784 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox3P53784 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox3P53784 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox3P53784 Gm13350-201ENSMUST00000120519 479 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox3P53784 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Gm43822-201ENSMUST00000200285 476 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm17795-201ENSMUST00000214505 757 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox3P53784 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm10012-201ENSMUST00000078252 192 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox3P53784 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.86□□□□□ -0.35
Sox3P53784 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox3P53784 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox3P53784 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Sox3P53784 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox3P53784 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox3P53784 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox3P53784 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox3P53784 Gm7584-201ENSMUST00000175829 940 ntBASIC12.85□□□□□ -0.35
Sox3P53784 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.85□□□□□ -0.35
Sox3P53784 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox3P53784 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox3P53784 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox3P53784 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.85□□□□□ -0.35
Sox3P53784 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox3P53784 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox3P53784 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Sox3P53784 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms