Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Prox1P48437 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Prox1P48437 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Prox1P48437 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Prox1P48437 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Prox1P48437 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.87□□□□□ -0.35
Prox1P48437 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.87□□□□□ -0.35
Prox1P48437 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.87□□□□□ -0.35
Prox1P48437 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Prox1P48437 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Gm9824-201ENSMUST00000178707 561 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Gm27631-201ENSMUST00000184163 466 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Gm27494-201ENSMUST00000184735 189 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.87□□□□□ -0.35
Prox1P48437 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Gm44719-201ENSMUST00000206404 149 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.87□□□□□ -0.35
Prox1P48437 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.87□□□□□ -0.35
Prox1P48437 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.87□□□□□ -0.35
Prox1P48437 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Prox1P48437 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Prox1P48437 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Prox1P48437 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Prox1P48437 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Prox1P48437 Mir1895-201ENSMUST00000122615 79 ntBASIC12.86□□□□□ -0.35
Prox1P48437 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.86□□□□□ -0.35
Prox1P48437 Gm18889-201ENSMUST00000174284 929 ntBASIC12.86□□□□□ -0.35
Prox1P48437 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.86□□□□□ -0.35
Prox1P48437 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.86□□□□□ -0.35
Prox1P48437 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Prox1P48437 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.86□□□□□ -0.35
Prox1P48437 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Prox1P48437 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Prox1P48437 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.85□□□□□ -0.35
Prox1P48437 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Prox1P48437 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Prox1P48437 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms