Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-6P43688 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.68□□□□□ -0.38
Nkx2-6P43688 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.67□□□□□ -0.38
Nkx2-6P43688 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.67□□□□□ -0.38
Nkx2-6P43688 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.67□□□□□ -0.38
Nkx2-6P43688 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-6P43688 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Mir1247-201ENSMUST00000116706 82 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm15198-201ENSMUST00000117283 177 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm12203-201ENSMUST00000118235 598 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm12209-201ENSMUST00000120089 596 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm19309-201ENSMUST00000218295 205 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-6P43688 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.66□□□□□ -0.38
Nkx2-6P43688 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms