Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.76□□□□□ -0.69
Cd27P41272 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.76□□□□□ -0.69
Cd27P41272 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.76□□□□□ -0.69
Cd27P41272 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cd27P41272 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cd27P41272 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.76□□□□□ -0.69
Cd27P41272 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cd27P41272 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cd27P41272 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd27P41272 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.75□□□□□ -0.69
Cd27P41272 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cd27P41272 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cd27P41272 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.75□□□□□ -0.69
Cd27P41272 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.75□□□□□ -0.69
Cd27P41272 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.75□□□□□ -0.69
Cd27P41272 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.75□□□□□ -0.69
Cd27P41272 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm7653-201ENSMUST00000214567 508 ntBASIC10.75□□□□□ -0.69
Cd27P41272 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.75□□□□□ -0.69
Cd27P41272 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.75□□□□□ -0.69
Cd27P41272 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cd27P41272 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Cd27P41272 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cd27P41272 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.74□□□□□ -0.69
Cd27P41272 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Cd27P41272 Gm12928-201ENSMUST00000117115 573 ntBASIC10.74□□□□□ -0.69
Cd27P41272 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.74□□□□□ -0.69
Cd27P41272 Gm11918-201ENSMUST00000121660 179 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms