Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Timp3P39876 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.02□□□□□ -0.65
Timp3P39876 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.02□□□□□ -0.65
Timp3P39876 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.02□□□□□ -0.65
Timp3P39876 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Timp3P39876 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Timp3P39876 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Timp3P39876 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Timp3P39876 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Timp3P39876 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Timp3P39876 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Gm15371-201ENSMUST00000117057 784 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Gm15678-201ENSMUST00000117573 960 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.01□□□□□ -0.65
Timp3P39876 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Gm43094-201ENSMUST00000196549 921 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Gm43438-201ENSMUST00000198133 379 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Timp3P39876 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.01□□□□□ -0.65
Timp3P39876 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.01□□□□□ -0.65
Timp3P39876 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Timp3P39876 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Mir698-201ENSMUST00000102164 109 ntBASIC11□□□□□ -0.65
Timp3P39876 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Gm4984-201ENSMUST00000115987 360 ntBASIC11□□□□□ -0.65
Timp3P39876 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11□□□□□ -0.65
Timp3P39876 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11□□□□□ -0.65
Timp3P39876 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11□□□□□ -0.65
Timp3P39876 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11□□□□□ -0.65
Timp3P39876 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11□□□□□ -0.65
Timp3P39876 Gm3809-201ENSMUST00000180973 1006 ntBASIC11□□□□□ -0.65
Timp3P39876 Gm29741-201ENSMUST00000192667 421 ntBASIC11□□□□□ -0.65
Timp3P39876 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Gm5035-201ENSMUST00000215581 927 ntBASIC11□□□□□ -0.65
Timp3P39876 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11□□□□□ -0.65
Timp3P39876 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11□□□□□ -0.65
Timp3P39876 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Timp3P39876 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Timp3P39876 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms