Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cdh4P39038 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdh4P39038 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdh4P39038 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cdh4P39038 Gm7653-201ENSMUST00000214567 508 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 Gm6983-201ENSMUST00000214912 628 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh4P39038 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh4P39038 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdh4P39038 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.84□□□□□ -0.35
Cdh4P39038 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh4P39038 Acot6-202ENSMUST00000222921 3622 ntBASIC12.83□□□□□ -0.35
Cdh4P39038 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.83□□□□□ -0.35
Cdh4P39038 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh4P39038 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdh4P39038 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cdh4P39038 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.83□□□□□ -0.36
Cdh4P39038 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdh4P39038 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12403-201ENSMUST00000121384 959 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12138-201ENSMUST00000122180 951 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cdh4P39038 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cdh4P39038 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdh4P39038 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdh4P39038 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.83□□□□□ -0.36
Cdh4P39038 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdh4P39038 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 Gm44397-201ENSMUST00000195950 113 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh4P39038 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.82□□□□□ -0.36
Cdh4P39038 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms