Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col2a1P28481 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Gm15236-201ENSMUST00000117309 379 ntBASIC15□□□□□ -0.01
Col2a1P28481 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15□□□□□ -0.01
Col2a1P28481 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Col2a1P28481 Gm16296-201ENSMUST00000159905 325 ntBASIC15□□□□□ -0.01
Col2a1P28481 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15□□□□□ -0.01
Col2a1P28481 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15□□□□□ -0.01
Col2a1P28481 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Col2a1P28481 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15□□□□□ -0.01
Col2a1P28481 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col2a1P28481 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Col2a1P28481 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col2a1P28481 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm12502-201ENSMUST00000120197 444 ntBASIC14.99□□□□□ -0.01
Col2a1P28481 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.99□□□□□ -0.01
Col2a1P28481 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.99□□□□□ -0.01
Col2a1P28481 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.99□□□□□ -0.01
Col2a1P28481 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col2a1P28481 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col2a1P28481 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Daam2-202ENSMUST00000224595 1926 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col2a1P28481 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.98□□□□□ -0.01
Col2a1P28481 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Col2a1P28481 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
Col2a1P28481 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col2a1P28481 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.98□□□□□ -0.01
Col2a1P28481 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.98□□□□□ -0.01
Col2a1P28481 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.98□□□□□ -0.01
Col2a1P28481 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col2a1P28481 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Gm30285-201ENSMUST00000214614 422 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Col2a1P28481 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.98□□□□□ -0.01
Col2a1P28481 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.98□□□□□ -0.01
Col2a1P28481 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col2a1P28481 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col2a1P28481 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.97□□□□□ -0.01
Col2a1P28481 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Col2a1P28481 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.97□□□□□ -0.01
Col2a1P28481 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col2a1P28481 Gm13736-201ENSMUST00000119272 253 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms