Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm14350-201ENSMUST00000116642 640 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Gm6447-201ENSMUST00000118905 835 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Gm15824-201ENSMUST00000119516 955 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.18□□□□□ -0.62
Col8a2P25318 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Mir1982-201ENSMUST00000157368 74 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Gm22331-201ENSMUST00000158066 136 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm27486-201ENSMUST00000184923 80 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.18□□□□□ -0.62
Col8a2P25318 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Col8a2P25318 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Col8a2P25318 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Col8a2P25318 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.18□□□□□ -0.62
Col8a2P25318 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.17□□□□□ -0.62
Col8a2P25318 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 Gm15371-201ENSMUST00000117057 784 ntBASIC11.17□□□□□ -0.62
Col8a2P25318 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.17□□□□□ -0.62
Col8a2P25318 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.17□□□□□ -0.62
Col8a2P25318 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.17□□□□□ -0.62
Col8a2P25318 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Col8a2P25318 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.17□□□□□ -0.62
Col8a2P25318 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Col8a2P25318 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.16□□□□□ -0.62
Col8a2P25318 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.16□□□□□ -0.62
Col8a2P25318 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Col8a2P25318 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col8a2P25318 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms