Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.98□□□□□ -0.33
Fv4P11370 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Fv4P11370 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fv4P11370 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.98□□□□□ -0.33
Fv4P11370 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fv4P11370 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fv4P11370 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fv4P11370 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fv4P11370 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Fv4P11370 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.97□□□□□ -0.33
Fv4P11370 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gm9522-201ENSMUST00000182394 926 ntBASIC12.97□□□□□ -0.33
Fv4P11370 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.97□□□□□ -0.33
Fv4P11370 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.97□□□□□ -0.33
Fv4P11370 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.97□□□□□ -0.33
Fv4P11370 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.97□□□□□ -0.33
Fv4P11370 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fv4P11370 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fv4P11370 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.96□□□□□ -0.33
Fv4P11370 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.96□□□□□ -0.33
Fv4P11370 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Fv4P11370 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Fv4P11370 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.96□□□□□ -0.33
Fv4P11370 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Fv4P11370 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.96□□□□□ -0.33
Fv4P11370 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.96□□□□□ -0.33
Fv4P11370 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.96□□□□□ -0.33
Fv4P11370 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.96□□□□□ -0.33
Fv4P11370 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Gm5161-201ENSMUST00000075243 853 ntBASIC12.96□□□□□ -0.33
Fv4P11370 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.96□□□□□ -0.33
Fv4P11370 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Fv4P11370 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fv4P11370 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Fv4P11370 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Fv4P11370 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Fv4P11370 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Fv4P11370 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Fv4P11370 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fv4P11370 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.95□□□□□ -0.34
Fv4P11370 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fv4P11370 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.95□□□□□ -0.34
Fv4P11370 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.95□□□□□ -0.34
Fv4P11370 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.95□□□□□ -0.34
Fv4P11370 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.95□□□□□ -0.34
Fv4P11370 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fv4P11370 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms