Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TtrP07309 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TtrP07309 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TtrP07309 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.69□□□□□ -0.86
TtrP07309 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
TtrP07309 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.68□□□□□ -0.86
TtrP07309 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.68□□□□□ -0.86
TtrP07309 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
TtrP07309 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.68□□□□□ -0.86
TtrP07309 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TtrP07309 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.68□□□□□ -0.86
TtrP07309 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.68□□□□□ -0.86
TtrP07309 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.68□□□□□ -0.86
TtrP07309 Gm18733-201ENSMUST00000173950 856 ntBASIC9.68□□□□□ -0.86
TtrP07309 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.68□□□□□ -0.86
TtrP07309 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.68□□□□□ -0.86
TtrP07309 Gm5364-201ENSMUST00000216789 889 ntBASIC9.68□□□□□ -0.86
TtrP07309 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.68□□□□□ -0.86
TtrP07309 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.68□□□□□ -0.86
TtrP07309 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.68□□□□□ -0.86
TtrP07309 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TtrP07309 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.68□□□□□ -0.86
TtrP07309 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.68□□□□□ -0.86
TtrP07309 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TtrP07309 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TtrP07309 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.67□□□□□ -0.86
TtrP07309 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TtrP07309 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TtrP07309 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC9.67□□□□□ -0.86
TtrP07309 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.67□□□□□ -0.86
TtrP07309 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TtrP07309 Gm9727-201ENSMUST00000161387 555 ntBASIC9.67□□□□□ -0.86
TtrP07309 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.67□□□□□ -0.86
TtrP07309 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TtrP07309 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms