Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.95□□□□□ -0.5
P06344 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.95□□□□□ -0.5
P06344 Gm27839-201ENSMUST00000184242 106 ntBASIC11.95□□□□□ -0.5
P06344 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
P06344 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.95□□□□□ -0.5
P06344 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
P06344 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.95□□□□□ -0.5
P06344 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.95□□□□□ -0.5
P06344 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.95□□□□□ -0.5
P06344 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
P06344 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.95□□□□□ -0.5
P06344 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.95□□□□□ -0.5
P06344 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
P06344 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06344 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.94□□□□□ -0.5
P06344 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.94□□□□□ -0.5
P06344 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06344 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06344 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.94□□□□□ -0.5
P06344 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.94□□□□□ -0.5
P06344 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.94□□□□□ -0.5
P06344 Gm17150-201ENSMUST00000165577 381 ntBASIC11.94□□□□□ -0.5
P06344 Gm38144-201ENSMUST00000192790 465 ntBASIC11.94□□□□□ -0.5
P06344 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
P06344 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
P06344 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
P06344 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.94□□□□□ -0.5
P06344 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06344 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.94□□□□□ -0.5
P06344 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06344 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.94□□□□□ -0.5
P06344 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.94□□□□□ -0.5
P06344 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06344 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.93□□□□□ -0.5
P06344 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
P06344 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P06344 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06344 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.93□□□□□ -0.5
P06344 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
P06344 Gm4984-201ENSMUST00000115987 360 ntBASIC11.93□□□□□ -0.5
P06344 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
P06344 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.93□□□□□ -0.5
P06344 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms