Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
DhfrP00375 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
DhfrP00375 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.13□□□□□ -0.47
DhfrP00375 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.13□□□□□ -0.47
DhfrP00375 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
DhfrP00375 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
DhfrP00375 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
DhfrP00375 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.13□□□□□ -0.47
DhfrP00375 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.13□□□□□ -0.47
DhfrP00375 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Gm25948-201ENSMUST00000175334 112 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Gm25144-201ENSMUST00000179561 110 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Gm25352-201ENSMUST00000179815 110 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.13□□□□□ -0.47
DhfrP00375 Gm5779-201ENSMUST00000218467 910 ntBASIC12.13□□□□□ -0.47
DhfrP00375 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
DhfrP00375 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
DhfrP00375 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
DhfrP00375 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DhfrP00375 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.12□□□□□ -0.47
DhfrP00375 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
DhfrP00375 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DhfrP00375 Gm6415-201ENSMUST00000118488 348 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Gm15693-201ENSMUST00000120470 637 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm13616-201ENSMUST00000120600 222 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
DhfrP00375 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
DhfrP00375 Gm9719-201ENSMUST00000162765 543 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
DhfrP00375 Gm8584-201ENSMUST00000171982 758 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm22175-201ENSMUST00000175007 78 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
DhfrP00375 Gm29310-201ENSMUST00000185468 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21825-201ENSMUST00000185728 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm29109-201ENSMUST00000185895 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21896-201ENSMUST00000186520 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21873-201ENSMUST00000186728 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21794-201ENSMUST00000187056 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21880-201ENSMUST00000187275 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21826-201ENSMUST00000187451 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21198-201ENSMUST00000188393 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21749-201ENSMUST00000189343 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21901-201ENSMUST00000189568 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm29424-201ENSMUST00000189716 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm28599-201ENSMUST00000189838 694 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21867-201ENSMUST00000189917 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm29269-201ENSMUST00000190087 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21722-201ENSMUST00000190153 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm28423-201ENSMUST00000190701 696 ntBASIC12.12□□□□□ -0.47
DhfrP00375 Gm21899-201ENSMUST00000190745 696 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms